着任前の研究成果 堀池 徳祐
論文
1) Horiike T, Miyata D, Hamada K, Saruhashi S, Shinozawa T, Kumar S, Chakraborty R, Komiyama T and Tateno Y, Phylogenetic construction of 17 bacterial phyla by new method and carefully selected orthologs.Gene. In-Press.
2) Saruhashi S, Hamada K, Miyata D, Horiike T, Shinozawa T, Comprehensive analysis of the origin of eukaryotic genomes. Genes & Genetic Systems, 83, 285-291, 2008.
3) Saruhashi S, Hamada K, Horiike T, Shinozawa T., Determination of whole prokaryotic phylogeny by the development of a random extraction method. Gene. 392, 1-2, 157-163, 2007
4) Horiike T, Hamada K, Miyata D, Shinozawa T, The origin of eukaryotes is suggested as the symbiosis of pyrococcus into γ-proteobacteria by phylogenetic tree based on gene content. Journal of Molecular Evolution, 59, 5, 606-619, 2004
5) Watanabe M, Kobayashi N, Shin-i T, Horiike T, Tateno Y, Kohara Y and Okada N, Extensive analysis of ORF sequences from two different cichlid species in Lake Victoria provides molecular evidence for a recent radiation event of the Victoria species flock: Identity of EST sequences between Haplochromis chilotes and Haplochromis sp. "Redtailsheller". Gene, 343;263-269, 2004
6) Sghaier H, Ai TL, Horiike T, Shinozawa T, Molecular chaperones: proposal of a systematic computer-oriented nomenclature and construction of a centralized database. In Silico Biology, 4, 3, 0025, 2004
7) Hamada K, Horiike T, Ota H, Mizuno K, and Shinozawa T, Presence of isochore structures in reptile genomes suggested by the relationship between GC contents of intron regions and those of coding regions. Genes & Genetic Systems, 78, 2, 195-198, 2003
8) Horiike T, Hamada K, Shinozawa T, Origin of Eukaryotic Cell Nuclei by Symbiosis of Archaea in Bacteria supported by the newly clarified origin of functional genes. Genes & Genetic Systems, 77, 5, 369-376, 2002
9) Hamada K, Horiike T, Kanaya S, Nakamura H, Ota H, Yatogo T, Okada K, Nakamura H and Shinozawa T, Changes in body temperature pattern in vertebrates do not influence the codon usages of α-globin genes. Genes & Genetic Systems, 77, 3, 197-207, 2002
10) Horiike T, Hamada K, Kanaya S, Shinozawa T, Origin of eukaryotic cell nuclei by symbiosis of Archaea in Bacteria is revealed by homology-hit analysis. Nature Cell Biology, 3, 2, 210-214, 2001
招待講演
1) NASA Astrobiology Institute and Canadian Institute for Advanced Research workshop: Lateral Gene Transfer and the Origins of Eukaryotes. May, 2004, Canada
